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Supercomputer
News & Information
The list including supercomputer-related news and information from Human Genome Center.
- 2020/05/20
- NVIDIA Parabricks, a genome data analysis software, is now available
- 2020/04/08
- Changes to SHIROKANE support in relation to new coronavirus infection (COVID-19)
- 2020/01/10
- NOTICE of system suspension due to SHIROKANE periodical inspection at HGC
- 2019/09/02
- NOTICE of system suspension due to SHIROKANE periodical inspection at HGC
- 2019/01/24
- NOTICE of system suspension due to SHIROKANE periodical inspection at HGC
- 2019/01/08
- NOTICE of HGC Mail Service terminate
- 2018/11/06
- HGC network maintenance
- 2018/08/10
- NOTICE of system suspension due to SHIROKANE September periodical inspection at HGC
- 2018/07/03
- NOTICE of IntelCompiler maintenance.
- 2018/06/21
- Notification on Changes to the Default Execution Queue for UGE Jobs
- 2018/01/16
- NOTICE of system suspension due to SHIROKANE February periodical inspection at HGC
- 2017/08/10
- HGC network maintenance
- 2017/08/10
- NOTICE of system suspension due to SHIROKANE periodical inspection at HGC
- 2017/06/29
- HGC sshare2 maintenance
- 2017/05/17
- HGC sshare3 maintenance
- 2017/04/07
- HGC Archive Disk maintenance
- 2017/03/31
- NOTICE of Shirokane4 beginning operations
- 2017/03/09
- NOTICE of system suspension due to Shirokane3 March periodical inspection at HGC
- 2017/01/13
- NOTICE of system suspension due to Shirokane3 periodical inspection at HGC
- 2016/12/02
- HGC network maintenance
- 2016/08/08
- NOTICE of system suspension due to Shirokane3 periodical inspection at HGC
- 2016/04/27
- A notice for the changes in UGE job default queue
- 2016/03/08
- HGC network maintenance
- 2016/01/19
- NOTICE of system suspension due to Shirokane3 periodical inspection at HGC
- 2015/11/20
- NOTICE of the file system sshare1 maintenance
- 2015/10/28
- NOTICE of Emergency Maintenance
- 2015/10/20
- NOTICE of Emergency Maintenance
- 2015/09/29
- NOTICE of UGE maintenance
- 2015/08/12
- NOTICE of system suspension due to supercomputer periodical inspection at HGC
- 2015/07/09
- End of mirroring GeneCards
- 2015/03/26
- NOTICE of Shirokane3 beginning operations
- 2015/03/26
- NOTICE of Shirokane3 beginning operations
- 2015/02/23
- FreeNX News of a connection stop
- 2015/01/20
- NOTICE of system suspension due to Shirokane2 periodical inspection at HGC
- 2014/08/11
- GeneCards updated version
- 2014/03/14
- NOTICE of network maintenance
- 2014/02/28
- Account renewal procedure for the next fiscal year
- 2014/01/10
- GeneCards updated version
- 2013/10/17
- NOTICE of system suspension due to Human Genome Center periodical inspection
- 2013/07/24
- Configuration of Java Startup Default Options JAVA_TOOL_OPTIONS
- 2013/07/23
- Automatic kill of heavy programs in login nodes implemented
- 2013/06/21
- GeneCards updated version
- 2013/06/18
- Notification of change of settings to limit the use of virtual memory of login nodes (gw, ngw)
- 2013/04/15
- Notice of PostgreSQL version up
- 2013/03/11
- Notification of Renewal Application at the end of the fiscal year
- 2013/01/18
- NOTICE of system suspension due to Human Genome Center periodical inspection and network maintenance
- 2013/01/11
- HGC network maintenance
- 2013/01/11
- Tutorial about the statistical language R
- 2012/12/27
- Notice of removal of previous versions of the software in the local disk of Shirokane1
- 2012/10/15
- Announcement (Completion of the maintenance of Shirokane2)
- 2012/10/01
- Announcement (Shirokane2 system maintenance)
- 2012/07/25
- NOTICE of system suspension due to Human Genome Center periodical inspection
- 2012/06/19
- HGC's Shirokane2 supercomputer ranks 183rd on new Top 500 List
- 2012/06/19
- Shirokane2 Filesystem Quota Restored
- 2012/06/12
- Announcement (Shirokane2 system maintenance)
- 2012/05/22
- Announcement (network maintenance)
- 2011/12/20
- Announcement (network maintenance)
- 2011/12/15
- [Urgent Announcement] network maintenance
- 2011/09/21
- Use of non-default queues (sjobs.q and night.q) available at HGC
- 2011/09/16
- NOTICE of system suspension due to Human Genome Center periodical inspection
- 2011/07/22
- GeneCards updated version
- 2011/04/20
- Notification of the shared holiday queue operation schedule during the Golden Week period
- 2011/04/18
- Commencement of fees for supercomputer use in Fiscal 2011
- 2011/03/31
- Notification ofthe newly established queue for electricity saving after the Tohoku-Pacific Ocean Earthquake and fee collection for this fiscal year
- 2010/09/17
- Notification of implementation schedule for Ruby version upgrade
- 2010/08/05
- Notice of scheduled system maintenance
- 2010/06/01
- GeneCards updated version
- 2010/04/22
- Notification of limit for number of simultaneous jobs
- 2010/03/30
- File number limit announcement
- 2010/03/01
- Notification of Renewal Application at the end of the fiscal year
- 2010/01/28
- Notification of shutdown of super computer for maintenance of power supply equipment and periodical inspection
- 2009/09/10
- Tutorial about the statistical language R
- 2009/08/28
- Notice of scheduled system maintenance
- 2009/07/27
- Notice of scheduled system maintenance
- 2009/03/09
- Network maintenance (3/22) ※ 3/22 add information
- 2009/03/09
- Network maintenance (3/10)
- 2009/03/02
- Your account of the HGC Supercomputer System will be ended on March 31, 2009
- 2008/03/03
- Your account of the HGC Supercomputer System will be ended on March 31, 2008
- 2008/01/23
- We will turn down all Supercomputers at HGC for maintenance
- 2007/07/24
- We will turn down all Supercomputers at HGC for maintenance
- 2007/04/20
- Network maintenance
- 2007/03/23
- About the end of the support to p53MDB
- 2007/03/02
- Your account of the HGC Supercomputer System will be ended on March 31, 2007
- 2007/01/24
- We will turn down all Supercomputers at HGC for maintenance
- 2006/03/03
- Your account of the HGC Supercomputer System will be ended on March 31, 2006
- 2006/01/31
- We will turn down all Supercomputers at HGC for maintenance
- 2006/01/31
- The PC cluster gyoku will be upgraded
- 2004/04/01
- Prof. Sakaki promoted to Director of RIKEN Genomic Sciences Center
- 2004/04/01
- Assoc. Prof. Sugano promoted to Prof. of Grad. School of Frontier Sci., Univ. Tokyo.
- 2003/11/01
- Assoc. Prof. Nakai promoted to Prof. of Lab. Funct. Analysis in silico
- 2003/07/01
- Prof. Kanehisa moved to Lab. Genome Database.
- 2003/04/01
- Prof. Takagi moved to Dept. Comput. Biol., Grad. School of Frontier Sci., Univ. Tokyo.
- 2003/01/01
- Replacement of a supercomputer system
- 2002/06/19
- Release of GENA and TissueDB
- 2002/06/12
- Release of OP (Ontology Project)
- 2002/02/18
- Release of Melina
- 2001/11/01
- Release of DBTSS
- 2001/03/11
- Release of iPSORT
- 2001/02/10
- Release of Signal-Ontology
- 2001/01/17
- Links to the full length cDNA project homepage
- 2000/11/06
- Second Release of DBTBS
- 2000/09/07
- Rel. HypothesisCreator; BLAST support for RefSeq
- 2000/09/01
- Public Release of DBTBS; Support of nr-aa in BACE
User's Guide
- Supercomputer User's Guide
- Commercial/Private Use
- Fee for SHIROKANE
- Application Procedure for Initial Registration
- Applications
- Technical Support Services
- FAQ about Procedures
Usage, Workshop
- Note for Users
- Workshop Schedule (News)
- Workshop Documents
- Supercomputer Wiki
- SHIROKANE Q&A
- Using Shirokane3
- Using Linux
- Using the Databases
- Using the Grid Engine (UGE)
- Hard Disk Crusher
- References on Bioinformatics
- Backup Policy
- FAQ
Results Achieved by the Supercomputer
System Information
Various Applications
- Application for Software Upgrade
- Application for Software Installation
- The HGC Supercomputer License Certification Exam
